20th of Novembre 2015 at EPFL
What is ilastik?
“ilastik is a simple, user-friendly tool for interactive image classification, segmentation and analysis. It is built as a modular software framework, which currently has workflows for automated (supervised) pixel- and object-level classification, automated and semi-automated object tracking, semi-automated segmentation and object counting without detection. Most analysis operations are performed lazily, which enables targeted interactive processing of data subvolumes, followed by complete volume analysis in offline batch mode. Using it requires no experience in image processing.”
Workshop outline
Also, we invite the participants to bring their own data during the “hands-on” session, so they can explore solving their own problem using ilastik, while being supported by the ilastik team.
The workshop will be given by Fred Hamprecht, Anna Kreshuk, Janez Ales, and Carsten Haubold.
Workshop schedule
09:00 – 10:40 – SV 1717A
Introduction to Ilastik and its workflows – Open to everyone
11:00 – 12:00 – AAC 132 AAC 106
Show and Tell – Participants only
12:00 – 13:00
Lunch break
13:00 – 15:00 – AAC 132 AAC 106
Hands-On session – Participants only
Registration
The registration page can be found here.
What should I bring?
- A laptop
- A mouse with a mouse wheel
- My data
Sponsors
We would like to thank our sponsors, the Life Science Faculty and the Swiss Institute of Bioinformatics, without which this workshop would not have been possible.